APAF_CANFA (Canis lupus familiaris)
Description [+]
- Synonyms: APAF_CANFA
- Species: Canis lupus familiaris
- Short gene description: Apoptotic protease-activating factor 1 (Apaf-1) (Fragment). [Source:UniProtKB/Swiss-Prot;Acc:Q9GL23]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: APAF_CANFA-C_familiaris
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | CARD | 8 | 92 |
PFAM A | NB-ARC | 132 | 420 |
PFAM A | WD40 | 611 | 649 |
PFAM A | WD40 | 653 | 691 |
PFAM A | WD40 | 695 | 735 |
PFAM A | WD40 | 739 | 777 |
PFAM A | WD40 | 878 | 916 |
PFAM A | WD40 | 999 | 1037 |
PFAM A | WD40 | 1082 | 1120 |
PFAM A | WD40 | 1124 | 1162 |
Protein sequence [+]
APAF_CANFA | Canis lupus familiaris | 9615 | length:1256
GRMDAKARNCLLQYREALEKDIKTSYIMDRMINDGVLTISEEEKVKNEPTQQQRAALLIK
TILKKDNYSYISFYNALIHEGYKDLAALLHSGIPVISSSNGGKDSVGGITSHVKTVLCEG
GVPQRPVVFVTRKKLVNAIRQNLFKLSDEPGWVVIYGMAGCGKSVLAAEAVRDHFFLDVG
CFPGGVHWVSVGKQDKAGLLMKLQNLCTRLDQDENFSQRPPLNIEEAKDRLRLLMLRKHP
RIRSLLILDDIWDSWILKAFDNQCQILLTTRDKSVTDSVMGPKYIVAVESDLGKEKGLEI
LSLFVNMKKADLPEQAHSIIKECKGSPLVVSLIGALLRDFPNRWDYYLRQLQNKQFKRIR
KSSFYDYEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEVEDI
LQEFVNKSLLFCDRNGKSFRYYLHDLQVDFLIEKNRNQLQDLHKKIVTQFQKHYQPHTLS
PDQEDCMYWYNFLAYHMASASMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHILD
EKDCAVCENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYQQAKLQAKQEVDHGMLY
LEWINKKNIKNLSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIK
AHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYL
LLATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKS
ANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAE
IHTGHHSTIQYCDFSPQNHLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDG
SSFLTSSDDQTIRLWETKKVCKNSAIVLKQEIDVVFQENEVMVLAVDNIKRLQLINGKTG
QIDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDD
GKTLISSSDDSSIQVWNWQSEEYVFLQAHQETVKDFKLLKNSKLLSWSFDGTVKKIWSII
TGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCS
VFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKML
VSAGGYLKWWNVVTGESSQTFYTNGTCLKKIHVSSDFKTYVTVDNLGILYILQMLE
TILKKDNYSYISFYNALIHEGYKDLAALLHSGIPVISSSNGGKDSVGGITSHVKTVLCEG
GVPQRPVVFVTRKKLVNAIRQNLFKLSDEPGWVVIYGMAGCGKSVLAAEAVRDHFFLDVG
CFPGGVHWVSVGKQDKAGLLMKLQNLCTRLDQDENFSQRPPLNIEEAKDRLRLLMLRKHP
RIRSLLILDDIWDSWILKAFDNQCQILLTTRDKSVTDSVMGPKYIVAVESDLGKEKGLEI
LSLFVNMKKADLPEQAHSIIKECKGSPLVVSLIGALLRDFPNRWDYYLRQLQNKQFKRIR
KSSFYDYEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEVEDI
LQEFVNKSLLFCDRNGKSFRYYLHDLQVDFLIEKNRNQLQDLHKKIVTQFQKHYQPHTLS
PDQEDCMYWYNFLAYHMASASMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHILD
EKDCAVCENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYQQAKLQAKQEVDHGMLY
LEWINKKNIKNLSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIK
AHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYL
LLATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKS
ANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAE
IHTGHHSTIQYCDFSPQNHLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDG
SSFLTSSDDQTIRLWETKKVCKNSAIVLKQEIDVVFQENEVMVLAVDNIKRLQLINGKTG
QIDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDD
GKTLISSSDDSSIQVWNWQSEEYVFLQAHQETVKDFKLLKNSKLLSWSFDGTVKKIWSII
TGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCS
VFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKML
VSAGGYLKWWNVVTGESSQTFYTNGTCLKKIHVSSDFKTYVTVDNLGILYILQMLE
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0001843 | neural tube closure | biological_proccess | IEA |
GO:0006915 | apoptosis | biological_proccess | IEA |
GO:0007275 | multicellular organismal development | biological_proccess | IEA |
GO:0007420 | brain development | biological_proccess | IEA |
GO:0030900 | forebrain development | biological_proccess | IEA |
GO:0006952 | defense response | biological_proccess | IEA |
GO:0042981 | regulation of apoptosis | biological_proccess | IEA |
GO:0008635 | activation of caspase activity by cytochrome c | biological_proccess | IEA |
GO:0006309 | DNA fragmentation during apoptosis | biological_proccess | IEA |
GO:0006919 | activation of caspase activity | biological_proccess | IEA |
GO:0051402 | neuron apoptosis | biological_proccess | IEA |
GO:0000166 | nucleotide binding | mollecular_function | IEA |
GO:0005515 | protein binding | mollecular_function | IEA |
GO:0005524 | ATP binding | mollecular_function | IEA |
GO:0016505 | apoptotic protease activator activity | mollecular_function | IEA |
GO:0042802 | identical protein binding | mollecular_function | IEA |
GO:0017111 | nucleoside-triphosphatase activity | mollecular_function | IEA |
GO:0005625 | soluble fraction | cell_component | IEA |
GO:0005634 | nucleus | cell_component | IEA |
GO:0005622 | intracellular | cell_component | IEA |
Check GO Evidence Codes here
KEGG Pathways [+]
Information from other databases [+]
- Ensembl genome browser [?] : ENSCAFG00000006556
- Expression info from Arrayexpress [?] : ENSCAFG00000006556
- Protein expression from Protein Atlas: [?] ENSCAFG00000006556
- entrezgene: 482620
Click on [?] for more information.