PARP1 (Danio rerio)
Description [+]
- Synonyms: PARP1
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Pisces; Danio rerio
- Short gene description: hypothetical protein LOC560788 [Source:RefSeq_peptide;Acc:NP_001038407]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: PARP1-D_rerio
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | zf-PARP | 13 | 89 |
PFAM A | zf-PARP | 116 | 200 |
PFAM A | PADR1 | 273 | 326 |
PFAM A | BRCT | 385 | 463 |
PFAM A | WGR | 547 | 632 |
PFAM A | PARP_reg | 661 | 794 |
PFAM A | PARP | 796 | 1006 |
Protein sequence [+]
parp1 | Danio rerio | 7955 | length:1013
MADSQDDKLYKAEYAKSGRASCKKCKDNIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAAVQSPSDISGFTDLRWDDQEKVKTAIESGGATGGKGGQKGAAKGEKTLNDFAVEYAKS
NRSTCKGCDQKIEKDQIRVSKKTVDPEKPQLGLIDRWYHTGCFVSRREELIFKPEYSAAQ
LKGFAVLRDEDKEELKKRLPAVKSEGKRKADEVDGGVSKKQKKEDEKLEQNLKDQSQLIW
GIKDKLKKFCSINDMKELLIANSQEVPSGESNIVDRLSDCMAFGSLKPCETCKGQLVFKS
DAYYCTGDISAWTKCVFKTQTPDRKDWVTPKEFSEIPFLKKFKFKRQDRVFPKDAPPAAA
TPSSGSTTSAATSVSSASKNLTEAPADKPLTGMKLLAVGKLSKNKDDLKKFVEDLGGKIT
GTASKAALCISSKKEIEKMSKKMEEVRDAGVRVVADDFLTDIKESGKALQELISLHAISP
WGAEVKVEAPAAAAATKSTGAHSSKSTGKVKEEEGGSKSKKMKLTVKGGAAVDPDSGLEN
CAHVLEQNGKIYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGGNKL
DKFYDKNSAMDNFCGVYEEKTGNAWASSNFTKYPNKFYPLEIDYGQDEEAVKKLTQSAGA
KSQLEKPVQDLIRMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLLSEVQQAVA
DSSSESLILDLSNRFYTLIPHDFGMKKPPLLSNVDYIQQKVQMLDNLLDIEVAYSLLRGG
VENNEKDPIDINYEKLKTKIEVVDKSSHEAQLILQYVKNTHAATHNTYTLDVEEIFKIER
EGEYQRYRPFKELPNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADMV
SKSANYCHTSQADPVGLILLGEVALGNMHELKKASHITKLPKGKHSVKGLGRSAPDPRAT
VSLNGVDIPLGKGMNTNIDDTSLLYNEYIVYDVSQVNLKYLLKIRFNYQTSLW
RAAVQSPSDISGFTDLRWDDQEKVKTAIESGGATGGKGGQKGAAKGEKTLNDFAVEYAKS
NRSTCKGCDQKIEKDQIRVSKKTVDPEKPQLGLIDRWYHTGCFVSRREELIFKPEYSAAQ
LKGFAVLRDEDKEELKKRLPAVKSEGKRKADEVDGGVSKKQKKEDEKLEQNLKDQSQLIW
GIKDKLKKFCSINDMKELLIANSQEVPSGESNIVDRLSDCMAFGSLKPCETCKGQLVFKS
DAYYCTGDISAWTKCVFKTQTPDRKDWVTPKEFSEIPFLKKFKFKRQDRVFPKDAPPAAA
TPSSGSTTSAATSVSSASKNLTEAPADKPLTGMKLLAVGKLSKNKDDLKKFVEDLGGKIT
GTASKAALCISSKKEIEKMSKKMEEVRDAGVRVVADDFLTDIKESGKALQELISLHAISP
WGAEVKVEAPAAAAATKSTGAHSSKSTGKVKEEEGGSKSKKMKLTVKGGAAVDPDSGLEN
CAHVLEQNGKIYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGGNKL
DKFYDKNSAMDNFCGVYEEKTGNAWASSNFTKYPNKFYPLEIDYGQDEEAVKKLTQSAGA
KSQLEKPVQDLIRMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLLSEVQQAVA
DSSSESLILDLSNRFYTLIPHDFGMKKPPLLSNVDYIQQKVQMLDNLLDIEVAYSLLRGG
VENNEKDPIDINYEKLKTKIEVVDKSSHEAQLILQYVKNTHAATHNTYTLDVEEIFKIER
EGEYQRYRPFKELPNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADMV
SKSANYCHTSQADPVGLILLGEVALGNMHELKKASHITKLPKGKHSVKGLGRSAPDPRAT
VSLNGVDIPLGKGMNTNIDDTSLLYNEYIVYDVSQVNLKYLLKIRFNYQTSLW
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0006471 | protein amino acid ADP-ribosylation | biological_proccess | IEA |
GO:0003677 | DNA binding | mollecular_function | IEA |
GO:0003950 | NAD+ ADP-ribosyltransferase activity | mollecular_function | IEA |
GO:0051287 | NAD or NADH binding | mollecular_function | IEA |
GO:0008270 | zinc ion binding | mollecular_function | IEA |
GO:0016740 | transferase activity | mollecular_function | IEA |
GO:0005634 | nucleus | cell_component | IEA |
GO:0005622 | intracellular | cell_component | IEA |
Check GO Evidence Codes here
KEGG Pathways [+]
Information from other databases [+]
- Gene info from ZFIN [?] ZDB-GENE-030131-3955
- Ensembl genome browser [?] : ENSDARG00000019529
- Expression info from Arrayexpress [?] : ENSDARG00000019529
- Protein expression from Protein Atlas: [?] ENSDARG00000019529
- Community gene edition from Wikigenes: [?] 560788
- entrezgene: 560788
- refseq_dna: NM_001044942
- refseq_peptide: NP_001038407
Click on [?] for more information.