SI:CH211-116I17.1 (Danio rerio)
Description [+]
- Synonyms: SI:CH211-116I17.1
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Pisces; Danio rerio
- Short gene description: hypothetical protein LOC555520 [Source:RefSeq_peptide;Acc:NP_001037799]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: SI:CH211-116I17.1-D_rerio
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | IBN_N | 22 | 102 |
Protein sequence [+]
si:ch211-116i17.1 | Danio rerio | 7955 | length:1025
MDPNRIIQALKGTIDPNLRLAAENELNQSYKIINFAPTLLQIIVSEQVEFPVRQAAAIYL
KNMVSQYWQDREPTLGEVVFPFNIHENDRGQIRENMVEAIIRCPESIRAQLTVCLRAIIK
HDFPGRWTGVVDKINLYLQSQNSGSWYGSLLALYQLVKNYEFKKAEERDPLLAAMQIFLP
RLQQLITQLLSDATFISVLIQKQILKIFHALVQLINNTVMTHWMEILRTVVDRDVPAIWF
SECLRGGFQETLEADEDDRPELIWWKCKKWALHILTRIFERYGSPGNVTKEYVEFADFFL
KTYALGIQQVLLKVMEQHRQRQYVSPRVLQQTLSFMTQGVSHSLTWRQMKPHMQQTITHE
LVFPLMCYKDEDERLWQEDPYEYIRMKFNVYDDHVSPATAAQTLLCTAARKRKEVLPQMM
EFCHQILVDPSADPRRTDGALHVIGTLAQPLLKKRVYRDQMELMLQNYVFPLLNSNLAYL
RARSCWVLHSFSPLKFHNELVLRNAVELVKHNLVEDKEMPVKVEAAIALQTLVRNQEQAK
VYIRPFIRPVMQELLHIIKETENDDLTGVIQKMICEYSEEVTVIAVDMTQNLAEIFSKIL
QSEEYEESEDKTVMALGILSTIDTILTVMGDRKEISQQLEGICLQVIGLVLQKPIIGMAE
FYEEILSLAFGLTCYCISPQMWQLLGVLYDVFQHDCFDYFTDMMPLLHNYVTVDTNMLLS
DPKYLEVIYTMCKKVLTSDAGEDPECHAAKLLEVIILQCRGRGIDQCIPLFVEAVLERLT
RGVKSSELRTMCLQVVIAALYYNPTLLIHTLENIRFPHSPEPITAQFINQWMNDTEFFLG
LHDRKMCVIGLSILMELPSRPAVLEEVVGQIVPSVLLLFLGLKHIYASRVLNKPEQFGRA
QGSEEEENEEIPSDEDEVGEKGVALQPSVAPTGNDNEDDDDEDDDEYWDDEGLEGTPLEE
YSTPLDCDNGEDEYQFFTASLLRVQSSDAGWYQSLTSPLNEDQRKQLQEIYNLAQQRRST
GVKGL
KNMVSQYWQDREPTLGEVVFPFNIHENDRGQIRENMVEAIIRCPESIRAQLTVCLRAIIK
HDFPGRWTGVVDKINLYLQSQNSGSWYGSLLALYQLVKNYEFKKAEERDPLLAAMQIFLP
RLQQLITQLLSDATFISVLIQKQILKIFHALVQLINNTVMTHWMEILRTVVDRDVPAIWF
SECLRGGFQETLEADEDDRPELIWWKCKKWALHILTRIFERYGSPGNVTKEYVEFADFFL
KTYALGIQQVLLKVMEQHRQRQYVSPRVLQQTLSFMTQGVSHSLTWRQMKPHMQQTITHE
LVFPLMCYKDEDERLWQEDPYEYIRMKFNVYDDHVSPATAAQTLLCTAARKRKEVLPQMM
EFCHQILVDPSADPRRTDGALHVIGTLAQPLLKKRVYRDQMELMLQNYVFPLLNSNLAYL
RARSCWVLHSFSPLKFHNELVLRNAVELVKHNLVEDKEMPVKVEAAIALQTLVRNQEQAK
VYIRPFIRPVMQELLHIIKETENDDLTGVIQKMICEYSEEVTVIAVDMTQNLAEIFSKIL
QSEEYEESEDKTVMALGILSTIDTILTVMGDRKEISQQLEGICLQVIGLVLQKPIIGMAE
FYEEILSLAFGLTCYCISPQMWQLLGVLYDVFQHDCFDYFTDMMPLLHNYVTVDTNMLLS
DPKYLEVIYTMCKKVLTSDAGEDPECHAAKLLEVIILQCRGRGIDQCIPLFVEAVLERLT
RGVKSSELRTMCLQVVIAALYYNPTLLIHTLENIRFPHSPEPITAQFINQWMNDTEFFLG
LHDRKMCVIGLSILMELPSRPAVLEEVVGQIVPSVLLLFLGLKHIYASRVLNKPEQFGRA
QGSEEEENEEIPSDEDEVGEKGVALQPSVAPTGNDNEDDDDEDDDEYWDDEGLEGTPLEE
YSTPLDCDNGEDEYQFFTASLLRVQSSDAGWYQSLTSPLNEDQRKQLQEIYNLAQQRRST
GVKGL
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0006886 | intracellular protein transport | biological_proccess | IEA |
GO:0000059 | protein import into nucleus, docking | biological_proccess | IEA |
GO:0008565 | protein transporter activity | mollecular_function | IEA |
GO:0005488 | binding | mollecular_function | IEA |
GO:0005634 | nucleus | cell_component | IEA |
GO:0005737 | cytoplasm | cell_component | IEA |
GO:0005643 | nuclear pore | cell_component | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Gene info from ZFIN [?] ZDB-GENE-060503-3
- Ensembl genome browser [?] : ENSDARG00000058159
- Expression info from Arrayexpress [?] : ENSDARG00000058159
- Protein expression from Protein Atlas: [?] ENSDARG00000058159
- Community gene edition from Wikigenes: [?] 555520
- entrezgene: 555520
- entrezgene: 100005760
- refseq_dna: NM_001044334
- refseq_dna: NM_001082984
- refseq_peptide: NP_001037799
- refseq_peptide: NP_001076453
Click on [?] for more information.