TRAF1 (Danio rerio)
Description [+]
- Synonyms: TRAF1
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Pisces; Danio rerio
- Short gene description: TNF receptor-associated factor 1 (Epstein-Barr virus-induced protein 6) [Source:UniProtKB/Swiss-Prot;Acc:Q13077]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: TRAF1-D_rerio
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | zf-TRAF | 126 | 180 |
PFAM A | MATH | 394 | 535 |
Protein sequence [+]
TRAF1 | Danio rerio | 7955 | length:537
SGSASDPSLNGVSSTPGFPQSICDEVPKDKYLCSNCNNVLNKARQTVCGHRYCLACVNWL
VRNNKDLVCTKCKGEDSNVESDTSVLTPNQFFNDVAINKEILDLKVHCANQGCPWRSTLK
NFEQDHQSQCEYALIPCNIGCGIMVQRKTLATHLESGCPNNKTACPSCTSVLTPRELQVL
LKKEKHVCPSSGDKKTAKTDKKQKNNQPANSKKKEPCIFSDVGCPFKGNPDKVKEHESCS
HAGHLQLLLDVTRALQRTLNSATERVYQDSPVFLEPGPNGSSLAPQADGDIETDGGDPGV
ELAAGQQLDALQQKVQVIENIISALNREVEKTQISVVAMNRDHCNSQQIIQHLEATVAEL
QQRLVRKDILISSLQQSISAQQDVSYDGTFYWRVCDVSQKQREAANSQKISQYSPAFYTA
RYGFKVCLRLYLNGDGAGKGSHISLFFVIMKGEYDPILSWPFKHKVTFFLLDQNQREHVI
DAFRPDLSSMSFHQPVSDMNVASGCPLFFPLKKLRSPKHAYCKDDTIYIKCVVDTSS
VRNNKDLVCTKCKGEDSNVESDTSVLTPNQFFNDVAINKEILDLKVHCANQGCPWRSTLK
NFEQDHQSQCEYALIPCNIGCGIMVQRKTLATHLESGCPNNKTACPSCTSVLTPRELQVL
LKKEKHVCPSSGDKKTAKTDKKQKNNQPANSKKKEPCIFSDVGCPFKGNPDKVKEHESCS
HAGHLQLLLDVTRALQRTLNSATERVYQDSPVFLEPGPNGSSLAPQADGDIETDGGDPGV
ELAAGQQLDALQQKVQVIENIISALNREVEKTQISVVAMNRDHCNSQQIIQHLEATVAEL
QQRLVRKDILISSLQQSISAQQDVSYDGTFYWRVCDVSQKQREAANSQKISQYSPAFYTA
RYGFKVCLRLYLNGDGAGKGSHISLFFVIMKGEYDPILSWPFKHKVTFFLLDQNQREHVI
DAFRPDLSSMSFHQPVSDMNVASGCPLFFPLKKLRSPKHAYCKDDTIYIKCVVDTSS
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0007165 | signal transduction | biological_proccess | IEA |
GO:0042981 | regulation of apoptosis | biological_proccess | IEA |
GO:0006350 | transcription | biological_proccess | IEA |
GO:0008270 | zinc ion binding | mollecular_function | IEA |
GO:0005515 | protein binding | mollecular_function | IEA |
GO:0004872 | receptor activity | mollecular_function | IEA |
GO:0046872 | metal ion binding | mollecular_function | IEA |
GO:0003677 | DNA binding | mollecular_function | IEA |
GO:0003899 | DNA-directed RNA polymerase activity | mollecular_function | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Gene info from ZFIN [?] ZDB-GENE-071120-4
- Ensembl genome browser [?] : ENSDARG00000069482
- Expression info from Arrayexpress [?] : ENSDARG00000069482
- Protein expression from Protein Atlas: [?] ENSDARG00000069482
- Community gene edition from Wikigenes: [?] 100148503
- entrezgene: 100148503
- refseq_dna: NM_001128381
- refseq_peptide: NP_001121853
Click on [?] for more information.