NLRP1A (Mus musculus)
Description [+]
- Synonyms: NLRP1A, NLRP1A, NLR FAMILY, PYRIN DOMAIN CONTAINING 1A
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Mammalia;Rodentia; Mus musculus
- Short gene description: NLR family, pyrin domain containing 1A [Source:RefSeq peptide;Acc:NP_001004142]
- Family: CARD-containing protein : CARD adapter protein
- Process: immunity,
- Pathways: inflammasome,
- Criteria: manually curated
- Curator comment:
- WIKI: NLRP1A-M_musculus
References [+]
- NALPs: a novel protein family involved in inflammation.
- Tschopp J, Martinon F, Burns K
- A newly discovered family of cytoplasmic proteins--the NALPs--has been implicated in the activation of caspase-1 by the Toll-like receptors (TLRs) during the cell's response to microbial infection. Like the structurally related apoptotic protease-activating factor-1 (APAF-1), which is responsible for the activation of caspase-9, the NALP1 protein forms a large, signal-induced multiprotein complex, the inflammasome, resulting in the activation of pro-inflammatory caspases. Nat Rev Mol Cell Biol. 2003 Feb;4(2):95-104.
- NOD-LRR proteins: role in host-microbial interactions and inflammatory disease.
- Inohara, Chamaillard, McDonald C, Nunez G
- Nods are cytosolic proteins that contain a nucleotide-binding oligomerization domain (NOD). These proteins include key regulators of apoptosis and pathogen resistance in mammals and plants. A large number of Nods contain leucine-rich repeats (LRRs), hence referred to as NOD-LRR proteins. Genetic variation in several NOD-LRR proteins, including human Nod2, Cryopyrin, and CIITA, as well as mouse Naip5, is associated with inflammatory disease or increased susceptibility to microbial infections. Nod1, Nod2, Cryopyrin, and Ipaf have been implicated in protective immune responses against pathogens. Together with Toll-like receptors, Nod1 and Nod2 appear to play important roles in innate and acquired immunity as sensors of bacterial components. Specifically, Nod1 and Nod2 participate in the signaling events triggered by host recognition of specific motifs in bacterial peptidoglycan and, upon activation, induce the production of proinflammatory mediators. Naip5 is involved in host resistance to Legionella pneumophila through cell autonomous mechanisms, whereas CIITA plays a critical role in antigen presentation and development of antigen-specific T lymphocytes. Thus, NOD-LRR proteins appear to be involved in a diverse array of processes required for host immune reactions against pathogens. Annu Rev Biochem. 2005;74:355-83.
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | NACHT | 133 | 302 |
PFAM A | CARD | 1209 | 1292 |
Protein sequence [+]
Nlrp1a | Mus musculus | 10090 | length:1300
MEESQSKQESSTKVAQHEGQEDVDPTFKTKKLMEVELMKHRVQLERNLKLRTFPGARTKQ
VKEALYPLLTWSSKSKNLFQNFTKLLLFKKLCQRGSENLVRESWYPCVPEEEAHMIDIQD
LFGPNLGTQKKPQLVIIEGAAGIGKSTLARLVKRAWKEGKLYRNDFHHVFFFSCRELAQY
EQLSLAELIVQGQEVPTAPIRQILSHPEKLLFILDGIDEPAWVLADQNPELCLHWSQTQP
VHTLLGSLLGKSILPGASFLLTTRTTALQKFIPSLEQPCQVEVLGFTLFERKNYFYKYFG
KKKGGVTTFTLVKSNSALLTLCEVPWVCWLVCTCLKKQMEQGGELSLTSQTTTALCLKYL
SLTIPGQHMRTQLRDLCSLAAEGVCQRRTLFSESDLCKQGLDEHAIASFLKIGVLQKQAS
SLSYSFAHLCLQEFFAAMSYILDDSEERHADMKNDRIVETLVERYGRQNLFEAPTVRFLF
GLLSKEELKKIEKLFSCSLHGKTKLKLLWHILGKSQPHQPPCLGLLHCLYENQDMELLTH
VMHDLQGTIVPGPDDLAHTVLQTNVKHLVIQTDMDLMVVTFCIKFCCHVRSLQLNRKVQQ
GHKFTAPGMVLYRWTPITDASWKIFFSNLKLARNLEELDLSGNPLSYYAVHSLCTTLRKR
GCQLKTLCTLPEDMNKAEVKNTEAKGSLGEKAPGPRNDIFPFPPAHCPYNQTSTSEHLPC
RLVECGLTSTYCSLLASVLSARSSLTELDLQLNDLGDGGVKMLCEGLRNPACNLSILWLD
QASLSDQVIAELRTLEAKNPKLLISSTWKPHVMVPTMNMDKEEVGDSQALLKQQRQQSGM
VGWLLKEDNVKKIKQNATNTYAHTHTHTHAELVPLKTFHPCSPVSPGDKHMEPLGTEDEF
WGPTGPVTTEVVDRERNLYRVQLPMAGSYHCPSTGLHFVVTRAVTIEIEFCAWSQYLDKT
PLQQSHMVVGPLFDIKAEQGAVTAVYLPHFVALQEGIVDSSLFHVAHFQEHGMVLETPAR
VEQHYAVLENPSFSPMGILLRMIPAVGHFIPITSTTLIYYHLYLEDVTFHLYLVPNDCSI
RKAIDDEEMKFQFVRINKPPPVDALYLGSRYIVSSSKLVEIIPKELELCYRSPGESQLFS
EIDIGHMDSEIKLQIKDKRHMNLKWEALLKPGKISLRPETLRVEERDTKGAFLCSFPVSS
LSLDAPSLLHFMDQHREQLVARVTSVDPLLDKLHGLVLSEDSYEVVRSETTNQDKMRKLF
SLSRSWSWDCKDQFYQALKETHPHLVMDILEKLGGVSVKS
VKEALYPLLTWSSKSKNLFQNFTKLLLFKKLCQRGSENLVRESWYPCVPEEEAHMIDIQD
LFGPNLGTQKKPQLVIIEGAAGIGKSTLARLVKRAWKEGKLYRNDFHHVFFFSCRELAQY
EQLSLAELIVQGQEVPTAPIRQILSHPEKLLFILDGIDEPAWVLADQNPELCLHWSQTQP
VHTLLGSLLGKSILPGASFLLTTRTTALQKFIPSLEQPCQVEVLGFTLFERKNYFYKYFG
KKKGGVTTFTLVKSNSALLTLCEVPWVCWLVCTCLKKQMEQGGELSLTSQTTTALCLKYL
SLTIPGQHMRTQLRDLCSLAAEGVCQRRTLFSESDLCKQGLDEHAIASFLKIGVLQKQAS
SLSYSFAHLCLQEFFAAMSYILDDSEERHADMKNDRIVETLVERYGRQNLFEAPTVRFLF
GLLSKEELKKIEKLFSCSLHGKTKLKLLWHILGKSQPHQPPCLGLLHCLYENQDMELLTH
VMHDLQGTIVPGPDDLAHTVLQTNVKHLVIQTDMDLMVVTFCIKFCCHVRSLQLNRKVQQ
GHKFTAPGMVLYRWTPITDASWKIFFSNLKLARNLEELDLSGNPLSYYAVHSLCTTLRKR
GCQLKTLCTLPEDMNKAEVKNTEAKGSLGEKAPGPRNDIFPFPPAHCPYNQTSTSEHLPC
RLVECGLTSTYCSLLASVLSARSSLTELDLQLNDLGDGGVKMLCEGLRNPACNLSILWLD
QASLSDQVIAELRTLEAKNPKLLISSTWKPHVMVPTMNMDKEEVGDSQALLKQQRQQSGM
VGWLLKEDNVKKIKQNATNTYAHTHTHTHAELVPLKTFHPCSPVSPGDKHMEPLGTEDEF
WGPTGPVTTEVVDRERNLYRVQLPMAGSYHCPSTGLHFVVTRAVTIEIEFCAWSQYLDKT
PLQQSHMVVGPLFDIKAEQGAVTAVYLPHFVALQEGIVDSSLFHVAHFQEHGMVLETPAR
VEQHYAVLENPSFSPMGILLRMIPAVGHFIPITSTTLIYYHLYLEDVTFHLYLVPNDCSI
RKAIDDEEMKFQFVRINKPPPVDALYLGSRYIVSSSKLVEIIPKELELCYRSPGESQLFS
EIDIGHMDSEIKLQIKDKRHMNLKWEALLKPGKISLRPETLRVEERDTKGAFLCSFPVSS
LSLDAPSLLHFMDQHREQLVARVTSVDPLLDKLHGLVLSEDSYEVVRSETTNQDKMRKLF
SLSRSWSWDCKDQFYQALKETHPHLVMDILEKLGGVSVKS
Structure links:
Evolution [+]
View protein alignment and tree with Jalview:  
Explore tree at phylomeDB:   Click here.
Homologs list [+]
Name | Relationship | Species |
---|
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0042981 | regulation of apoptosis | biological_proccess | IEA |
GO:0008219 | cell death | biological_proccess | IDA |
GO:0042742 | defense response to bacterium | biological_proccess | IDA |
GO:0006917 | induction of apoptosis | biological_proccess | ISS |
GO:0006919 | activation of caspase activity | biological_proccess | ISS |
GO:0051402 | neuron apoptosis | biological_proccess | ISS |
GO:0006952 | defense response | biological_proccess | IEA |
GO:0005515 | protein binding | mollecular_function | IEA |
GO:0005524 | ATP binding | mollecular_function | ISS |
GO:0019899 | enzyme binding | mollecular_function | ISS |
GO:0000166 | nucleotide binding | mollecular_function | IEA |
GO:0017111 | nucleoside-triphosphatase activity | mollecular_function | IEA |
GO:0005622 | intracellular | cell_component | IEA |
Check GO Evidence Codes here
Curated Isoforms [+]
Transcript | Translation |
---|---|
OTTMUST00000013758 | OTTMUSP00000022852 |
OTTMUST00000049360 * | OTTMUSP00000022851 * |
Info from The Vertebrate Genome Annotation (VEGA) database.
(*) Canonical transcript and translation forms.
Information from other databases [+]
- Gene info from MGI [?] MGI:2684861
- Ensembl genome browser [?] : ENSMUSG00000069830
- Expression info from Arrayexpress [?] : ENSMUSG00000069830
- Protein expression from Protein Atlas: [?] ENSMUSG00000069830
- Community gene edition from Wikigenes: [?] 195046
- entrezgene: 195046
- refseq_dna: NM_001004142
- refseq_peptide: NP_001004142
Click on [?] for more information.