NOD1 (Oryzias latipes)
Description [+]
- Synonyms: NOD1
- Species: Oryzias latipes
- Short gene description: Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y239]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: NOD1-O_latipes
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | CARD | 5 | 88 |
PFAM A | NACHT | 180 | 354 |
Protein sequence [+]
NOD1 | Oryzias latipes | 8090 | length:934
SGPCLPLLTYHRELLVSTLTSIQCLLDNLLLNGFFCQEDVEIVQRIPTKPDKVRKVLELV
QCKGEEACEFFIYIISKVCDAYRDLQPWLEEINFHPRGSVIGMEVVNSDPISRYSQKLRY
EISRDTSFIMSYGQQEETQLEDLYTDTVMELLNDTNENLGFLDNLDQLLGDDAVFNPQGE
VIYVMGDAGVGKSILLQKLANLWSKKELKTDALFFFKFRCRMFNIFKDAEQISLRNLLFK
YNCYPDHDPDNEVFDYILRFPEKVVFTFDGYDEIQEDVDIVKFPEVVSPEDKANALQLLM
SLLSGKLLKGSKKVMTARTGIEIQSRVLRKKVALRGFSPDHLKAYIDLHFKEQEHRELVS
VQLDASPHLCGLCSTPLFCWIVFKSFRHLQTMHDDFHLPDTCITLTNIFLLLCEVFLSRL
ASPAASSLRKGTRCTSETFRAGLRPLTAFSRLALQGLERRSLICSQEEISECGLTEEDLA
LGFLKPVSDYDPGRGPGSFEFIHTTLQSFLAAFALVLEEQAPTGTILKFFSECSWRQEPS
CLPFTFCIGRPVNLSLSKPFSTNEHFLFTNLFLCGLLAKSQLGLMGHLVCSNLLRKKRAT
LKSYLSTVVRSHMKGLPTYKGDDGTKVHVLPNFLWMVRCIFETGSKQIAQMTAKGITPYF
IKLGYCNVYSGDCTALNFVLQHHRTLLRLDMDNNNISDYGVKQLRPSFSRMTVVRLSVNS
LSDSSIEILAEELCKHKIVQILGLYNNNITDVGAKLVAHIIEECPKLAVLKLGKNKITGV
GGRYLALAIQKSTSIFDVGMWGNSIGDEGAEAFAKALRNHPTLTNLSLAANGITSRGGRI
LAEGLRENSVLRIFWLVENKLGDDAAPTLAELVRANTGLSHLWLINNMLTVVGIRRLAEA
LAVNTKFKEICVKGNQISKEEEKEFLLERRLRFH
QCKGEEACEFFIYIISKVCDAYRDLQPWLEEINFHPRGSVIGMEVVNSDPISRYSQKLRY
EISRDTSFIMSYGQQEETQLEDLYTDTVMELLNDTNENLGFLDNLDQLLGDDAVFNPQGE
VIYVMGDAGVGKSILLQKLANLWSKKELKTDALFFFKFRCRMFNIFKDAEQISLRNLLFK
YNCYPDHDPDNEVFDYILRFPEKVVFTFDGYDEIQEDVDIVKFPEVVSPEDKANALQLLM
SLLSGKLLKGSKKVMTARTGIEIQSRVLRKKVALRGFSPDHLKAYIDLHFKEQEHRELVS
VQLDASPHLCGLCSTPLFCWIVFKSFRHLQTMHDDFHLPDTCITLTNIFLLLCEVFLSRL
ASPAASSLRKGTRCTSETFRAGLRPLTAFSRLALQGLERRSLICSQEEISECGLTEEDLA
LGFLKPVSDYDPGRGPGSFEFIHTTLQSFLAAFALVLEEQAPTGTILKFFSECSWRQEPS
CLPFTFCIGRPVNLSLSKPFSTNEHFLFTNLFLCGLLAKSQLGLMGHLVCSNLLRKKRAT
LKSYLSTVVRSHMKGLPTYKGDDGTKVHVLPNFLWMVRCIFETGSKQIAQMTAKGITPYF
IKLGYCNVYSGDCTALNFVLQHHRTLLRLDMDNNNISDYGVKQLRPSFSRMTVVRLSVNS
LSDSSIEILAEELCKHKIVQILGLYNNNITDVGAKLVAHIIEECPKLAVLKLGKNKITGV
GGRYLALAIQKSTSIFDVGMWGNSIGDEGAEAFAKALRNHPTLTNLSLAANGITSRGGRI
LAEGLRENSVLRIFWLVENKLGDDAAPTLAELVRANTGLSHLWLINNMLTVVGIRRLAEA
LAVNTKFKEICVKGNQISKEEEKEFLLERRLRFH
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Information from other databases [+]
- Ensembl genome browser [?] : ENSORLG00000003812
- Expression info from Arrayexpress [?] : ENSORLG00000003812
- Protein expression from Protein Atlas: [?] ENSORLG00000003812
Click on [?] for more information.