NLRC4 (Pongo pygmaeus)
Description [+]
- Synonyms: NLRC4
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Mammalia;Primates;Hominidae; Pongo pygmaeus
- Short gene description: NLR family CARD domain-containing protein 4 (Caspase recruitment domain-containing protein 12)(Ice protease-activating factor)(Ipaf)(CARD, LRR, and NACHT-containing protein)(Clan protein) [Source:UniProtKB/Swiss-Prot;Acc:Q9NPP4]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: NLRC4-P_pygmaeus
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | CARD | 1 | 87 |
PFAM A | NACHT | 163 | 315 |
Protein sequence [+]
NLRC4 | Pongo pygmaeus | 9600 | length:1023
MNFIKDNSQALIQRMGMTVIKQITDDLFVWNVLNCEEVNIICCEKVEQDAARGIIHMILK
KGSESCNLFLKSLEEWNYPLFQDLNGQSLFHQTSEGDLDDLAQDLKDLYHTPSFLNFYPL
GEDIDIIFNLKSTFTEPVLWRKDQHHHRVEQLTLNGLLQALQSPCIIEGESGKGKSTLLQ
RIAMLWGSGKCKALTKFKFVFFLRLSRAQGGLFETCEQLLDIPGTIRKQTFMAMLLKLRQ
RVLFLLDGYNEFKPQNCPEIEALIKENHRFKNMVIVTTTTECLRHIRQFGALTAEVGDMT
EDSAQALIREVLIKELAEGLLLQIQKSRCLRNLMKTPLFVVITCAIQMGESEFHSHTQTT
LFHTFYDLLIQKNKHKHKGVAASDFVRSLDHCGDLALEGVFSHKFDFELEDVSSVNEDVL
LTTGLLCKYTAQRFKPKYKFFHKSFQEYTAGRRLSSLLTSCEPEEVIKGNGYLQKMVSIS
DITSTYSSLLRYTCGSSVEATRAVMKHLAAVYQHGCLLGLSIAKRPLWRQESLQSVKNTT
EQEILKAININSFVECGIHLYQESTSKSALSQEFEAFFQGKSLYINSENIPDYLFDFFEH
LPNCASALDFIKLDFYGGAMASQEKAAEDTGGIHMEEAPETYIPSRAVSLFFNWKQEFRT
LEVTLRDFSKLNKQDIKYLGKIFSSATSLRLQIKRCAGVAGSLSLVLSTCKNICSLMVEA
SPLTIEDERHITSVTNLKTLSIHDLQNQQLPGGLTDSLGNLKNLTKLIMDNIKMNEEDAI
KLAEGLKNLKKMCLFRLTHLSDIGEGMDYIVKSLSSEPCDLEEIQLVSCCLSANAVKILA
QNLHNLVKLSILDLSENYLEKDGNEALHELIDRLNMLEQLTALMLPWGCDVQGSLSSLLK
HLEEVPQLVKLGLKNWRLTDTEIRILGAFFGKNPLKNFQQLNLAGNRVSSDGWLAFMGVF
ENLKQLVFFDFSTKEFLPDAALVRKLGHVLSKLTFLQEARLVGWQFDDDDLSVIKGAFKL
VTA
KGSESCNLFLKSLEEWNYPLFQDLNGQSLFHQTSEGDLDDLAQDLKDLYHTPSFLNFYPL
GEDIDIIFNLKSTFTEPVLWRKDQHHHRVEQLTLNGLLQALQSPCIIEGESGKGKSTLLQ
RIAMLWGSGKCKALTKFKFVFFLRLSRAQGGLFETCEQLLDIPGTIRKQTFMAMLLKLRQ
RVLFLLDGYNEFKPQNCPEIEALIKENHRFKNMVIVTTTTECLRHIRQFGALTAEVGDMT
EDSAQALIREVLIKELAEGLLLQIQKSRCLRNLMKTPLFVVITCAIQMGESEFHSHTQTT
LFHTFYDLLIQKNKHKHKGVAASDFVRSLDHCGDLALEGVFSHKFDFELEDVSSVNEDVL
LTTGLLCKYTAQRFKPKYKFFHKSFQEYTAGRRLSSLLTSCEPEEVIKGNGYLQKMVSIS
DITSTYSSLLRYTCGSSVEATRAVMKHLAAVYQHGCLLGLSIAKRPLWRQESLQSVKNTT
EQEILKAININSFVECGIHLYQESTSKSALSQEFEAFFQGKSLYINSENIPDYLFDFFEH
LPNCASALDFIKLDFYGGAMASQEKAAEDTGGIHMEEAPETYIPSRAVSLFFNWKQEFRT
LEVTLRDFSKLNKQDIKYLGKIFSSATSLRLQIKRCAGVAGSLSLVLSTCKNICSLMVEA
SPLTIEDERHITSVTNLKTLSIHDLQNQQLPGGLTDSLGNLKNLTKLIMDNIKMNEEDAI
KLAEGLKNLKKMCLFRLTHLSDIGEGMDYIVKSLSSEPCDLEEIQLVSCCLSANAVKILA
QNLHNLVKLSILDLSENYLEKDGNEALHELIDRLNMLEQLTALMLPWGCDVQGSLSSLLK
HLEEVPQLVKLGLKNWRLTDTEIRILGAFFGKNPLKNFQQLNLAGNRVSSDGWLAFMGVF
ENLKQLVFFDFSTKEFLPDAALVRKLGHVLSKLTFLQEARLVGWQFDDDDLSVIKGAFKL
VTA
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0042981 | regulation of apoptosis | biological_proccess | IEA |
GO:0042742 | defense response to bacterium | biological_proccess | IEA |
GO:0050702 | interleukin-1 beta secretion | biological_proccess | IEA |
GO:0043065 | positive regulation of apoptosis | biological_proccess | IEA |
GO:0006919 | activation of caspase activity | biological_proccess | IEA |
GO:0016045 | detection of bacterium | biological_proccess | IEA |
GO:0006954 | inflammatory response | biological_proccess | IEA |
GO:0043281 | regulation of caspase activity | biological_proccess | IEA |
GO:0005515 | protein binding | mollecular_function | IEA |
GO:0042803 | protein homodimerization activity | mollecular_function | IEA |
GO:0005524 | ATP binding | mollecular_function | IEA |
GO:0005622 | intracellular | cell_component | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Ensembl genome browser [?] : ENSPPYG00000012506
- Expression info from Arrayexpress [?] : ENSPPYG00000012506
- Protein expression from Protein Atlas: [?] ENSPPYG00000012506
Click on [?] for more information.