NOD2 (Rattus norvegicus)
Description [+]
- Synonyms: NOD2
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Mammalia;Rodentia; Rattus norvegicus
- Short gene description: nucleotide-binding oligomerization domain containing 2 [Source:RefSeq_peptide;Acc:NP_001099642]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: NOD2-R_norvegicus
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | CARD | 48 | 138 |
PFAM A | CARD | 148 | 235 |
PFAM A | NACHT | 310 | 480 |
Protein sequence [+]
Nod2 | Rattus norvegicus | 10116 | length:1056
MLEVSDSLFLTELLRTVAAGQCAVFVAEFIGRSQGLWSGIWGCDMCSQEDFQAQRSQLVA
LLVSGSLEGFESILDWLLSWDVLSREDYEGLSLPGQPLSHSARRLLDTVCNKGVWGCQKL
FEAVQEAQANSHTFELQGCWDVHSLHPTRDLQSHRPAIVRRLCSHVEAILELARDEGFLS
QYECEEIRLPIFTSSQRARRLLDLAAVKANGLAAFLLQHVRKLPASLSLPYEAAECQKFT
AKLRTMVSAQSRFLSTYDGSENLCLEDIYTENTLELRTEVGTAGALQKSPATLGLEELFG
THGHLNKDADTILVVGEAGSGKSTLLQRLHLLWASGQNFREFLFIFPFSCRQLQCMTKPL
SLRTLLFEHCCWPDVGQDDVFQFLLDHPDRVLLTFDGLDEFKFRFTDRERHCSPLDPTSV
QTLLFNLLQGNLLKNACKVLTSRPDAVSALLRKFVRTECHLKGFSEEGIKLYLRKHHREP
GVADRLIHLIQATSALHGLCHLPVFSWMVSRCHRELLLQNRGFPTTSTDMYLLILQHFLL
HASPPDSFPLGLGPGLLQSRLSTLLHLGHLALQGLAMSCYVFSAQQLQAAQVDSEDISLG
FLVRAQSVVPGSKAPLEFLHITFQCFFAAFYLAVSADTSAASLKHLFSCGRPGNSLLLRL
LPNLCIQGSRVKGGQAALLQKAEPHNLQITAAFLAGLLSQQHRDLLAACQVPERVLLQRQ
ARARSCLAHSLREHFHSIPPAVPGETKSMHAMPGFIWLIRSLYEMQEVQLAREAVRRLDI
GHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDHNSVGDVGVEQLLPCLGVCTALYLRD
NNISDRGARTLVECALRCEQLQKLALFNNKLTDGCASSVAKLLAHKQNFLSLRVGNNHIT
AAGAEVLAQGLKSNTSLQFLGFWGNSVGDKGSQALAEVVADHQRLKWLSLVGNNIGSVGA
HALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALL
QALNRNSTVLEVWLRGNTFSPEEAQTLSSSDARLLL
LLVSGSLEGFESILDWLLSWDVLSREDYEGLSLPGQPLSHSARRLLDTVCNKGVWGCQKL
FEAVQEAQANSHTFELQGCWDVHSLHPTRDLQSHRPAIVRRLCSHVEAILELARDEGFLS
QYECEEIRLPIFTSSQRARRLLDLAAVKANGLAAFLLQHVRKLPASLSLPYEAAECQKFT
AKLRTMVSAQSRFLSTYDGSENLCLEDIYTENTLELRTEVGTAGALQKSPATLGLEELFG
THGHLNKDADTILVVGEAGSGKSTLLQRLHLLWASGQNFREFLFIFPFSCRQLQCMTKPL
SLRTLLFEHCCWPDVGQDDVFQFLLDHPDRVLLTFDGLDEFKFRFTDRERHCSPLDPTSV
QTLLFNLLQGNLLKNACKVLTSRPDAVSALLRKFVRTECHLKGFSEEGIKLYLRKHHREP
GVADRLIHLIQATSALHGLCHLPVFSWMVSRCHRELLLQNRGFPTTSTDMYLLILQHFLL
HASPPDSFPLGLGPGLLQSRLSTLLHLGHLALQGLAMSCYVFSAQQLQAAQVDSEDISLG
FLVRAQSVVPGSKAPLEFLHITFQCFFAAFYLAVSADTSAASLKHLFSCGRPGNSLLLRL
LPNLCIQGSRVKGGQAALLQKAEPHNLQITAAFLAGLLSQQHRDLLAACQVPERVLLQRQ
ARARSCLAHSLREHFHSIPPAVPGETKSMHAMPGFIWLIRSLYEMQEVQLAREAVRRLDI
GHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDHNSVGDVGVEQLLPCLGVCTALYLRD
NNISDRGARTLVECALRCEQLQKLALFNNKLTDGCASSVAKLLAHKQNFLSLRVGNNHIT
AAGAEVLAQGLKSNTSLQFLGFWGNSVGDKGSQALAEVVADHQRLKWLSLVGNNIGSVGA
HALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALL
QALNRNSTVLEVWLRGNTFSPEEAQTLSSSDARLLL
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0042981 | regulation of apoptosis | biological_proccess | IEA |
GO:0032760 | positive regulation of tumor necrosis factor production | biological_proccess | IEA |
GO:0043123 | positive regulation of I-kappaB kinase/NF-kappaB cascade | biological_proccess | IEA |
GO:0046330 | positive regulation of JNK cascade | biological_proccess | IEA |
GO:0051092 | positive regulation of NF-kappaB transcription factor activity | biological_proccess | IEA |
GO:0050718 | positive regulation of interleukin-1 beta secretion | biological_proccess | IEA |
GO:0032874 | positive regulation of stress-activated MAPK cascade | biological_proccess | IEA |
GO:0007242 | intracellular signaling cascade | biological_proccess | IEA |
GO:0016045 | detection of bacterium | biological_proccess | IEA |
GO:0032498 | detection of muramyl dipeptide | biological_proccess | IEA |
GO:0032740 | positive regulation of interleukin-17 production | biological_proccess | IEA |
GO:0002367 | cytokine production during immune response | biological_proccess | IEA |
GO:0005515 | protein binding | mollecular_function | IEA |
GO:0000166 | nucleotide binding | mollecular_function | IEA |
GO:0017111 | nucleoside-triphosphatase activity | mollecular_function | IEA |
GO:0019901 | protein kinase binding | mollecular_function | IEA |
GO:0019899 | enzyme binding | mollecular_function | IEA |
GO:0032500 | muramyl dipeptide binding | mollecular_function | IEA |
GO:0050700 | CARD domain binding | mollecular_function | IEA |
GO:0005622 | intracellular | cell_component | IEA |
GO:0009986 | cell surface | cell_component | IEA |
GO:0005829 | cytosol | cell_component | IEA |
GO:0005886 | plasma membrane | cell_component | IEA |
GO:0031982 | vesicle | cell_component | IEA |
GO:0008180 | signalosome | cell_component | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Ensembl genome browser [?] : ENSRNOG00000014124
- Expression info from Arrayexpress [?] : ENSRNOG00000014124
- Protein expression from Protein Atlas: [?] ENSRNOG00000014124
- entrezgene: 291912
- refseq_dna: NM_001106172
- refseq_peptide: NP_001099642
Click on [?] for more information.