NLRP6 (Rattus norvegicus)
Description [+]
- Synonyms: NLRP6
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Mammalia;Rodentia; Rattus norvegicus
- Short gene description: NLR family, pyrin domain containing 6 Gene [Source:MGI Symbol;Acc:MGI:2141990]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: NLRP6-R_norvegicus
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | PAAD_DAPIN | 15 | 94 |
PFAM A | NACHT | 168 | 337 |
Protein sequence [+]
Nlrp6 | Rattus norvegicus | 10116 | length:855
MDAAGASCSSSEAVARELLLAALQDLSQEQLKRFRHKLRDAPLDGRSIPWGRLEHSDAVD
LTDKLIEFYAPEPAVDVTRKILKKADIRDKKYREHVLRQHAKVKERNARSVKINKRFTKL
LIAPGSGAGEDELLGTSGEPEPERARRSDTHTFNRLFRGNDDEGPRPLTVVLQGPAGIGK
TMAAKKILYDWAGGKLYHSQVDFAFFMPCGELLERPGTRSLADLILEQCPDRTAPVRRIL
AQPHRLLFILDGADELPTLAAPEATPCRDPFEATSGLRVLSGLLSQELLPSARLLVTSRN
ATLGRLQGRLCSPQCAEVRGFSDKDKKKYFFKFFRDERKAERAYRFVKENETLYALCFVP
FVCWIVCTVLLQQMELGRDLSRTSKTTTSVYLLFITSMLKSAGTNGPRVQGELRMLCRLA
REGILKHQAQFSEKDLERLKLQGSQVQTMFLSKKELPGVLETVVTYQFIDQSFQEFLAAL
SYLLDAEGAPGNSAGSVQMLLNSDAGLRGHLALTTRFLFGLLSTERIRDIGNHFGCVVPG
RVKQDTLRWVQGQSQPKVATVGAEKKDELKDEEAEEEEEEEEEEEEELNFGLELLYCLYE
TQEDDFVRQALSSLPEMVLERVRLTRMDLEVLSYCVQCCPDGQALRLVSCGLVAAKEKKK
KKKSFMNRLKGSQSTGKQPPASLLRPLCEAMITQQCGLSILTLSHCKLPDAVCRDLSEAL
KVAPSLRELGLLQNRLTEAGLRLLSQGLAWPKCKVQTLRIQMPGLQEVIHYLVIVLQQSP
VLTTLDLSGCQLPGTVVEPLCSALKHPKCGLKTLSLTSVELTENPLRELQAVKTLKPDLA
IIHSKLGTHPQPLKG
LTDKLIEFYAPEPAVDVTRKILKKADIRDKKYREHVLRQHAKVKERNARSVKINKRFTKL
LIAPGSGAGEDELLGTSGEPEPERARRSDTHTFNRLFRGNDDEGPRPLTVVLQGPAGIGK
TMAAKKILYDWAGGKLYHSQVDFAFFMPCGELLERPGTRSLADLILEQCPDRTAPVRRIL
AQPHRLLFILDGADELPTLAAPEATPCRDPFEATSGLRVLSGLLSQELLPSARLLVTSRN
ATLGRLQGRLCSPQCAEVRGFSDKDKKKYFFKFFRDERKAERAYRFVKENETLYALCFVP
FVCWIVCTVLLQQMELGRDLSRTSKTTTSVYLLFITSMLKSAGTNGPRVQGELRMLCRLA
REGILKHQAQFSEKDLERLKLQGSQVQTMFLSKKELPGVLETVVTYQFIDQSFQEFLAAL
SYLLDAEGAPGNSAGSVQMLLNSDAGLRGHLALTTRFLFGLLSTERIRDIGNHFGCVVPG
RVKQDTLRWVQGQSQPKVATVGAEKKDELKDEEAEEEEEEEEEEEEELNFGLELLYCLYE
TQEDDFVRQALSSLPEMVLERVRLTRMDLEVLSYCVQCCPDGQALRLVSCGLVAAKEKKK
KKKSFMNRLKGSQSTGKQPPASLLRPLCEAMITQQCGLSILTLSHCKLPDAVCRDLSEAL
KVAPSLRELGLLQNRLTEAGLRLLSQGLAWPKCKVQTLRIQMPGLQEVIHYLVIVLQQSP
VLTTLDLSGCQLPGTVVEPLCSALKHPKCGLKTLSLTSVELTENPLRELQAVKTLKPDLA
IIHSKLGTHPQPLKG
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0006952 | defense response | biological_proccess | IEA |
GO:0045449 | regulation of transcription | biological_proccess | IEA |
GO:0000166 | nucleotide binding | mollecular_function | IEA |
GO:0005515 | protein binding | mollecular_function | IEA |
GO:0005524 | ATP binding | mollecular_function | IEA |
GO:0042277 | peptide binding | mollecular_function | IMP |
GO:0005198 | structural molecule activity | mollecular_function | IEA |
GO:0017111 | nucleoside-triphosphatase activity | mollecular_function | IEA |
GO:0030528 | transcription regulator activity | mollecular_function | IEA |
GO:0005737 | cytoplasm | cell_component | IEA |
GO:0019028 | viral capsid | cell_component | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Ensembl genome browser [?] : ENSRNOG00000014685
- Expression info from Arrayexpress [?] : ENSRNOG00000014685
- Protein expression from Protein Atlas: [?] ENSRNOG00000014685
Click on [?] for more information.