TBL3 (Tetraodon nigroviridis)
Description [+]
- Synonyms: TBL3
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Pisces; Tetraodon nigroviridis
- Short gene description: WD repeat-containing protein SAZD (Transducin beta-like 3 protein) [Source:UniProtKB/Swiss-Prot;Acc:Q12788]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: TBL3-T_nigroviridis
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | WD40 | 96 | 135 |
PFAM A | WD40 | 139 | 179 |
PFAM A | WD40 | 183 | 221 |
PFAM A | WD40 | 369 | 407 |
PFAM A | WD40 | 413 | 452 |
PFAM A | WD40 | 467 | 505 |
PFAM A | WD40 | 512 | 550 |
PFAM A | WD40 | 554 | 592 |
PFAM A | WD40 | 596 | 634 |
PFAM A | Utp13 | 655 | 790 |
Protein sequence [+]
TBL3 | Tetraodon nigroviridis | 99883 | length:822
NMASSHLHFKTNYAVSSKIEPFYKGGRVQISKDENYIFCTCGSRVNVLEISTGKIVHSVE
HDDQEDITCFALSSDDELLVTASRALLLKQWDWRQAQCTRSWRAIHTAPVASMTFDSTST
LLATGGCDGTIKLWDVVKQYCTHNLRGSSGVIQLVQFHPDIDRLQLFSSSMDCSIRIWDL
SSSQCVCVLQSHYSAVTSLSFSLDGDTMVSSGRDKICTVWDLKQQKAKRTIPIYEAVEGA
VILPENQDFSQIGVKKPKLHFITAGSKGILRVWDPNTARCVFSQTLTGVSAADNPRSLTH
LLLLPASLRLATVTAEHNIMLYQLPGLTTLQQFVGYSDEVLDVKFLGKDDSHIVVATNSC
QLNVFELASNSCQILYGHTDTILSLDVFRKGLLFASCGKDKLVCVWHMAGGSVRCVARGY
SHTNAVGAVSCSRMKASFVVSGSLDCTVKVWDLPADLTAAEDNIHQLTPRATEKAHDKDV
NSVTVSPNDKLLASASQDRTAKLWSLAGEGSLGLLGVCRGHRRGVWAVCFSPVDQVLATS
SADGTTKLWSLQDFSCLKTFEGHDASVLKVIFVSRGTQLLTSGSDGLVKLWTIKTNECVK
TLDAHQDKVWGLHGSRRDDKMVTGSADSNITVWEDVTEIEMAEEQAKQEEHILKQQELSN
LLQEKKYLKALGLAISLDQPHTVLTVIKAIRQTEDNSELLEKTVLKLRVDQKEALLRFCV
AWNTNAKNCQDAQVVLQVLLTHVPPEELLQYQGARTHLEALVPYTERHMQRIGRLLQASM
FLNYMWQKMRVVGEPSSDASVTRRVSARIQAKEGNRANSQQH
HDDQEDITCFALSSDDELLVTASRALLLKQWDWRQAQCTRSWRAIHTAPVASMTFDSTST
LLATGGCDGTIKLWDVVKQYCTHNLRGSSGVIQLVQFHPDIDRLQLFSSSMDCSIRIWDL
SSSQCVCVLQSHYSAVTSLSFSLDGDTMVSSGRDKICTVWDLKQQKAKRTIPIYEAVEGA
VILPENQDFSQIGVKKPKLHFITAGSKGILRVWDPNTARCVFSQTLTGVSAADNPRSLTH
LLLLPASLRLATVTAEHNIMLYQLPGLTTLQQFVGYSDEVLDVKFLGKDDSHIVVATNSC
QLNVFELASNSCQILYGHTDTILSLDVFRKGLLFASCGKDKLVCVWHMAGGSVRCVARGY
SHTNAVGAVSCSRMKASFVVSGSLDCTVKVWDLPADLTAAEDNIHQLTPRATEKAHDKDV
NSVTVSPNDKLLASASQDRTAKLWSLAGEGSLGLLGVCRGHRRGVWAVCFSPVDQVLATS
SADGTTKLWSLQDFSCLKTFEGHDASVLKVIFVSRGTQLLTSGSDGLVKLWTIKTNECVK
TLDAHQDKVWGLHGSRRDDKMVTGSADSNITVWEDVTEIEMAEEQAKQEEHILKQQELSN
LLQEKKYLKALGLAISLDQPHTVLTVIKAIRQTEDNSELLEKTVLKLRVDQKEALLRFCV
AWNTNAKNCQDAQVVLQVLLTHVPPEELLQYQGARTHLEALVPYTERHMQRIGRLLQASM
FLNYMWQKMRVVGEPSSDASVTRRVSARIQAKEGNRANSQQH
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0006364 | rRNA processing | biological_proccess | IEA |
GO:0032040 | small-subunit processome | cell_component | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Ensembl genome browser [?] : ENSTNIG00000018011
- Expression info from Arrayexpress [?] : ENSTNIG00000018011
- Protein expression from Protein Atlas: [?] ENSTNIG00000018011
Click on [?] for more information.