WDR3 (Tetraodon nigroviridis)
Description [+]
- Synonyms: WDR3
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Pisces; Tetraodon nigroviridis
- Short gene description: WD repeat-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9UNX4]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: WDR3-T_nigroviridis
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | WD40 | 56 | 94 |
PFAM A | WD40 | 98 | 136 |
PFAM A | WD40 | 483 | 521 |
PFAM A | WD40 | 578 | 616 |
PFAM A | WD40 | 620 | 658 |
PFAM A | WD40 | 662 | 700 |
PFAM A | Utp12 | 718 | 937 |
Protein sequence [+]
WDR3 | Tetraodon nigroviridis | 99883 | length:941
MGLTKQYLRYVASAVFGVIGSQKANVAYVTLRGGEKGRYVAAAACEHVFIWDVRKGEKVM
ILEGQKHEVTFLCPSPDGVHVAVGYEDGAVRIFSLLNGESNVSFNGHKSAVSVMRYDGLG
ARLVTGSKDTDVIVWDIINECGLYRLRGHKDLITQALFLRDRNLLVTSSKDSFVKWWDLD
TQHCFKTIVGHRSEVQCGGMVLLDQDNRLLTGSADSELRAWDITYLQEIDESPEEVQKPL
SSVLSRLLAHPLSLPPPSLQRILSCHKAGSILREARDRVVSLTTDARSAVIACHANESVL
ELFRVLPEVEVQQKMKKKEKKAKKKAAQAPEDAAEDAGTPAVTRTLKDEIVRLTNIKASA
KIRWAECVWCSGGELKVALLLQNNTVETYSLRTADKTPAGTKTARLTLGGHRTDVRTLAF
SSDNLAVLSASGDTVKVWNRATLQVIRTMACEYALCSLFVPGDRQIVLGSESGKLQIFEL
ASAALLESVDAHAGAVWALCLAPDQRGLVTGSADKTVKFWDFELVKDQDAGHKRLTVKHT
RTLQLEEDVLCVKLSPDHRLLAVSLLDCTVKLFYADTLKFFLSLYGHKLPVLCLDICHDS
TLIATGSADRNVKIWGLDFGDCHRSMFAHDDSVMFLQFVPKTHLFFTAGKDKKIKQWDAD
KFEHVQTLEGHHREVWCLAISPNGDHLVTASHDKSLRLWERTREPVILEEEREMEREAEF
EESMAKGDVPVVPGETPGEAAPAGKKTVETVKAAERIMEALELFREERRKLEDHEYACRA
AGRQLPAPKPNPILVAYGNVTPSRYVLDVIKKVRSSELEVSLLVLPFSYVPELLKLFNAY
IQQGLEVELVCRCLFFLLRIHFGQISSNQMLLTVMDQLRTNTLARVGQIRDVMGFNSAAL
QFLQRELESKEEVTFFAEATGKLKKVKLKGRRVEPRVSDLN
ILEGQKHEVTFLCPSPDGVHVAVGYEDGAVRIFSLLNGESNVSFNGHKSAVSVMRYDGLG
ARLVTGSKDTDVIVWDIINECGLYRLRGHKDLITQALFLRDRNLLVTSSKDSFVKWWDLD
TQHCFKTIVGHRSEVQCGGMVLLDQDNRLLTGSADSELRAWDITYLQEIDESPEEVQKPL
SSVLSRLLAHPLSLPPPSLQRILSCHKAGSILREARDRVVSLTTDARSAVIACHANESVL
ELFRVLPEVEVQQKMKKKEKKAKKKAAQAPEDAAEDAGTPAVTRTLKDEIVRLTNIKASA
KIRWAECVWCSGGELKVALLLQNNTVETYSLRTADKTPAGTKTARLTLGGHRTDVRTLAF
SSDNLAVLSASGDTVKVWNRATLQVIRTMACEYALCSLFVPGDRQIVLGSESGKLQIFEL
ASAALLESVDAHAGAVWALCLAPDQRGLVTGSADKTVKFWDFELVKDQDAGHKRLTVKHT
RTLQLEEDVLCVKLSPDHRLLAVSLLDCTVKLFYADTLKFFLSLYGHKLPVLCLDICHDS
TLIATGSADRNVKIWGLDFGDCHRSMFAHDDSVMFLQFVPKTHLFFTAGKDKKIKQWDAD
KFEHVQTLEGHHREVWCLAISPNGDHLVTASHDKSLRLWERTREPVILEEEREMEREAEF
EESMAKGDVPVVPGETPGEAAPAGKKTVETVKAAERIMEALELFREERRKLEDHEYACRA
AGRQLPAPKPNPILVAYGNVTPSRYVLDVIKKVRSSELEVSLLVLPFSYVPELLKLFNAY
IQQGLEVELVCRCLFFLLRIHFGQISSNQMLLTVMDQLRTNTLARVGQIRDVMGFNSAAL
QFLQRELESKEEVTFFAEATGKLKKVKLKGRRVEPRVSDLN
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0006364 | rRNA processing | biological_proccess | IEA |
GO:0032040 | small-subunit processome | cell_component | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Ensembl genome browser [?] : ENSTNIG00000005299
- Expression info from Arrayexpress [?] : ENSTNIG00000005299
- Protein expression from Protein Atlas: [?] ENSTNIG00000005299
Click on [?] for more information.