TRAF6 (Tetraodon nigroviridis)
Description [+]
- Synonyms: TRAF6
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Pisces; Tetraodon nigroviridis
- Short gene description: TNF receptor-associated factor 6 (Interleukin-1 signal transducer)(RING finger protein 85) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y4K3]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: TRAF6-T_nigroviridis
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | zf-C3HC4 | 81 | 119 |
PFAM A | zf-TRAF | 162 | 213 |
PFAM A | zf-TRAF | 215 | 272 |
PFAM A | MATH | 389 | 531 |
Protein sequence [+]
TRAF6 | Tetraodon nigroviridis | 99883 | length:553
MACFDSSSKGSLEEDSCDGAIGGELSGCALVMMEKEQESLLSPSESPGTYMSGASSSFHD
GTHQQGYDVEFDPPLESKYECPICLMALRNAIQTPCGHRFCKNCIEKSIRDAGQRCPVDN
EMLSKEQLFPDNFAKREILSLIVRCSNPGCTSKMELRHLENHLASCEFATVPCPHCQQSV
KKTLLEEHTSVQCRRRPVSCPDCVEIFVYEEKERHEQQCPFASVMCPHCDMDLTRDQMES
HCDTDCPKAPIACNFSLFGCKERMQRHDLARHMQDFTQMHMHYMADFLRSLNLNGTIPKD
QGAAASASSCSKGALSSNCTPCQPTEEMQRLREMDRRLVKQDHQLRELIILKENQTGQIA
ELRKRVSVLEESMRELESQHCTGIYIWRLKDFSVLLRNQEAGLPVVEHSPGFYTGRPGYK
LCLRLHLQSPVAQRCSNFISLFVHTMQGAYDGLLTWPFQGTIRLAILDQGPEGQHHIEVM
ETKPDLQAFQRPTIIRNPKGFGYVTFLHLHHLKERAYVKDDALLIRCEVTPRFDNMLHRD
GVTVQPRGSEASI
GTHQQGYDVEFDPPLESKYECPICLMALRNAIQTPCGHRFCKNCIEKSIRDAGQRCPVDN
EMLSKEQLFPDNFAKREILSLIVRCSNPGCTSKMELRHLENHLASCEFATVPCPHCQQSV
KKTLLEEHTSVQCRRRPVSCPDCVEIFVYEEKERHEQQCPFASVMCPHCDMDLTRDQMES
HCDTDCPKAPIACNFSLFGCKERMQRHDLARHMQDFTQMHMHYMADFLRSLNLNGTIPKD
QGAAASASSCSKGALSSNCTPCQPTEEMQRLREMDRRLVKQDHQLRELIILKENQTGQIA
ELRKRVSVLEESMRELESQHCTGIYIWRLKDFSVLLRNQEAGLPVVEHSPGFYTGRPGYK
LCLRLHLQSPVAQRCSNFISLFVHTMQGAYDGLLTWPFQGTIRLAILDQGPEGQHHIEVM
ETKPDLQAFQRPTIIRNPKGFGYVTFLHLHHLKERAYVKDDALLIRCEVTPRFDNMLHRD
GVTVQPRGSEASI
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0016567 | protein ubiquitination | biological_proccess | IEA |
GO:0007165 | signal transduction | biological_proccess | IEA |
GO:0042981 | regulation of apoptosis | biological_proccess | IEA |
GO:0009615 | response to virus | biological_proccess | IEA |
GO:0009617 | response to bacterium | biological_proccess | IEA |
GO:0045941 | positive regulation of transcription | biological_proccess | IEA |
GO:0046872 | metal ion binding | mollecular_function | IEA |
GO:0008270 | zinc ion binding | mollecular_function | IEA |
GO:0005515 | protein binding | mollecular_function | IEA |
GO:0004842 | ubiquitin-protein ligase activity | mollecular_function | IEA |
GO:0016563 | transcription activator activity | mollecular_function | IEA |
GO:0000151 | ubiquitin ligase complex | cell_component | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Ensembl genome browser [?] : ENSTNIG00000009597
- Expression info from Arrayexpress [?] : ENSTNIG00000009597
- Protein expression from Protein Atlas: [?] ENSTNIG00000009597
Click on [?] for more information.