APAF1 (Takifugu rubripes)
Description [+]
- Synonyms: APAF1
- Species: Takifugu rubripes
- Short gene description: Apoptotic protease-activating factor 1 (Apaf-1) [Source:UniProtKB/Swiss-Prot;Acc:O14727]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: APAF1-T_rubripes
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | CARD | 6 | 90 |
PFAM A | NB-ARC | 129 | 416 |
PFAM A | WD40 | 649 | 687 |
PFAM A | WD40 | 738 | 776 |
PFAM A | WD40 | 872 | 910 |
PFAM A | WD40 | 996 | 1034 |
PFAM A | WD40 | 1038 | 1078 |
PFAM A | WD40 | 1082 | 1120 |
PFAM A | WD40 | 1124 | 1162 |
Protein sequence [+]
APAF1 | Takifugu rubripes | 31033 | length:1260
LEEGARSSLLRFRHQLEQDIKPSYLMDHMISDGVLSVDEEEKIRTLATRKDQAVALLDLL
LRKDNRTYISFYNSLVKETYDDLATLLHEYLPRLSPGATKNASDGCTPYVQTVLSEGGVP
QRPVVFVSRPELVNQIREKLYRLQKEPGWVTVFGMAGSGKSVLAAEAVRHHSLIEECFPG
GIHWLSIGQLDKPDLLVKIQALCFRLEQGLDSQSLHRPPNSLDEAKERLRYLMLRRHPRS
LLILDDVWDSMVLKTFDIHARILLTTRNRSLTDSVGGAKYEVEVESGLDEKKGLEILALY
TDNKPHGLPEEARSIVRECKGSPLVMSLIGALLKEKPNRWCYYLRQLQQKQFKRIRKSSS
YDYDALDQAMAASIEVLPPEHQELYKDLTVLEKDIKIPAKVLSVLWVLEPEEVEDILEEF
VNKSLLYVDINHKPYLYYLHDLQLDFLVEQNQAQLERLHTKVVQQYQLHYKGDPPLSGDE
ECLYWIRFLTLHMAKAGLSQELYSLMFSLDWVSIKARIMGPAHLISDYVEYGHILDKKNS
DVRSQFQEFLSLNGHHLEQRPFPDVVQLALSQPHASDVYRQALQEAQEQASTGKLYFDWL
NKNSMESLSHLVIHPHQGSVYSACFSRDGTKIASSGACKTLKVFKSTTGEKLTEIMAHDD
EVLCCAFSPDDRLLATCSSDRKVKVWNVEQARLLRVFEEEHEEQVNHCQFTNTMRRLLLV
TCSNDACMNVKLWNLNKPSSQNTMFGHFEPVNHCCFSPDDAIVSTSSNDGTVKLFRASSA
NEWKTISVRDQVAENDEEVLVKCSTWTADGKRIICAARNAVLVFDVETSDMLLEIKTSRL
SMVQYCHACPTSNLLAIAFSNYAVELWDLEANKKMADCSGHLSWVQRVQFSPDGSQLLSC
SDDHTVRLWETTKVHTSSAVCLKRDSDVLFDQEEIIISAADNCNRLQVRNGRTGSVLFQS
EEKSSRIRCTCLCRQPPAVVIGQEDGTVQVLELPTGKVLATLLGHTKTVFCCQFSQDGQT
LITSSEDTTIRVWRWLSGECKVLQGHREQVRCFTLLSSSPSKMRLLSWSFDGTVKMWDTE
SGEKLQDVEAHQGAILSCHVSPDGCLFATTSADRTAKLWHCESWQCVHALKGHQECVRSC
RFSWDSRRVATGDDNGEIRLWSVSDGSLLKICSRDSKDGMDSLHGGWVTDLHFSRDDSLL
VSTGGYIKWWDVAQGEALQTFHPTGSALKRIHVSADFSTFVTIDNIGILYVLQRVIASGC
LRKDNRTYISFYNSLVKETYDDLATLLHEYLPRLSPGATKNASDGCTPYVQTVLSEGGVP
QRPVVFVSRPELVNQIREKLYRLQKEPGWVTVFGMAGSGKSVLAAEAVRHHSLIEECFPG
GIHWLSIGQLDKPDLLVKIQALCFRLEQGLDSQSLHRPPNSLDEAKERLRYLMLRRHPRS
LLILDDVWDSMVLKTFDIHARILLTTRNRSLTDSVGGAKYEVEVESGLDEKKGLEILALY
TDNKPHGLPEEARSIVRECKGSPLVMSLIGALLKEKPNRWCYYLRQLQQKQFKRIRKSSS
YDYDALDQAMAASIEVLPPEHQELYKDLTVLEKDIKIPAKVLSVLWVLEPEEVEDILEEF
VNKSLLYVDINHKPYLYYLHDLQLDFLVEQNQAQLERLHTKVVQQYQLHYKGDPPLSGDE
ECLYWIRFLTLHMAKAGLSQELYSLMFSLDWVSIKARIMGPAHLISDYVEYGHILDKKNS
DVRSQFQEFLSLNGHHLEQRPFPDVVQLALSQPHASDVYRQALQEAQEQASTGKLYFDWL
NKNSMESLSHLVIHPHQGSVYSACFSRDGTKIASSGACKTLKVFKSTTGEKLTEIMAHDD
EVLCCAFSPDDRLLATCSSDRKVKVWNVEQARLLRVFEEEHEEQVNHCQFTNTMRRLLLV
TCSNDACMNVKLWNLNKPSSQNTMFGHFEPVNHCCFSPDDAIVSTSSNDGTVKLFRASSA
NEWKTISVRDQVAENDEEVLVKCSTWTADGKRIICAARNAVLVFDVETSDMLLEIKTSRL
SMVQYCHACPTSNLLAIAFSNYAVELWDLEANKKMADCSGHLSWVQRVQFSPDGSQLLSC
SDDHTVRLWETTKVHTSSAVCLKRDSDVLFDQEEIIISAADNCNRLQVRNGRTGSVLFQS
EEKSSRIRCTCLCRQPPAVVIGQEDGTVQVLELPTGKVLATLLGHTKTVFCCQFSQDGQT
LITSSEDTTIRVWRWLSGECKVLQGHREQVRCFTLLSSSPSKMRLLSWSFDGTVKMWDTE
SGEKLQDVEAHQGAILSCHVSPDGCLFATTSADRTAKLWHCESWQCVHALKGHQECVRSC
RFSWDSRRVATGDDNGEIRLWSVSDGSLLKICSRDSKDGMDSLHGGWVTDLHFSRDDSLL
VSTGGYIKWWDVAQGEALQTFHPTGSALKRIHVSADFSTFVTIDNIGILYVLQRVIASGC
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0006952 | defense response | biological_proccess | IEA |
GO:0042981 | regulation of apoptosis | biological_proccess | IEA |
GO:0006915 | apoptosis | biological_proccess | IEA |
GO:0005515 | protein binding | mollecular_function | IEA |
GO:0005524 | ATP binding | mollecular_function | IEA |
GO:0000166 | nucleotide binding | mollecular_function | IEA |
GO:0017111 | nucleoside-triphosphatase activity | mollecular_function | IEA |
GO:0005622 | intracellular | cell_component | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Ensembl genome browser [?] : ENSTRUG00000013192
- Expression info from Arrayexpress [?] : ENSTRUG00000013192
- Protein expression from Protein Atlas: [?] ENSTRUG00000013192
Click on [?] for more information.