NOD1 (Takifugu rubripes)
Description [+]
- Synonyms: NOD1
- Species: Takifugu rubripes
- Short gene description: Nucleotide-binding oligomerization domain-containing protein 1 (Caspase recruitment domain-containing protein 4) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y239]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: NOD1-T_rubripes
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | CARD | 12 | 97 |
PFAM A | NACHT | 189 | 362 |
Protein sequence [+]
NOD1 | Takifugu rubripes | 31033 | length:939
MSQTGEAKMSYVDLLTVHRELLVSTLKSVQCLLDNLSACGFFCEEDVDIVQQTVTRTEKV
RKILEVVQCKGEQACEYFLKVIFTVRDAYIDLQPWLKDINYAPSCEVTPMPVVNTDPRQV
SRYCEKLRDDMIRDTSFIMSYGQREEAHLEELYTDTLMELLNDSNERLGFLESLDHLLGD
HGVFNPHGETIYIMGDAGVGKSLLLQKLQNLWSKKELQTDAIFFFKFRCRMFNCFKDKEQ
ISLRELLFKYNCYPDHDPDNEVFDYILRFPEKVIFTFDGYDEVQEDADQMNAPEVASPED
KAYPLQLLMGLLCGKLLKGSQKVVTARTGIDFRQRVVRKKVALRGFSPAHLKTYISLHFK
EQEHRELVSVQLDASPHLWSLCSTPLFCWITFKSFRHLHNVHDSFHLPDTCVTLTGMFLM
LSEVFLSHAASSTPSLLKNNARCTSETFRCGLRTLTAFAKLAIQGVERDGFIFSQEEVSG
CGLTEEELSLGFLRAAGSCDGSPMFEFLHATLQSFLAAFALVLNEEAPPSSILRFFTESR
RRASSCQPFRCCIQDSSKVITKASSSANEHLQFTNLFLCGLLAKANMGLIDLLASPNILK
KKRSVLKSYLSASVRSHLQDVPQYKSSEGSKIHGLSRLLWLLRCIFETGSKEIAQRTARG
IPAGLLKLAYLNMFSSDCTAVSFVLQHQPKLYGLDMDNNNIGDYGVKQLRPMFSKLTILR
LSVNNLYDGSVEVLAEEICKYKIIQTLGLYSNHLTDVGAELVARVIEECPKLQVVKIGKN
NITHVGGRRLAAAIQKSTSIFDVGMWGNCIGDEGAEAFSEALKNHPSLTNLSLSVNGITS
RGGRCLAEALQHNSVLRIFWLVINEFTDEVAPHLAELIRANTGLSHLWLISNRLTVEGIG
QLAEALGHNTTLKEICVKGNQVSGEEEKLFATEKRLFFH
RKILEVVQCKGEQACEYFLKVIFTVRDAYIDLQPWLKDINYAPSCEVTPMPVVNTDPRQV
SRYCEKLRDDMIRDTSFIMSYGQREEAHLEELYTDTLMELLNDSNERLGFLESLDHLLGD
HGVFNPHGETIYIMGDAGVGKSLLLQKLQNLWSKKELQTDAIFFFKFRCRMFNCFKDKEQ
ISLRELLFKYNCYPDHDPDNEVFDYILRFPEKVIFTFDGYDEVQEDADQMNAPEVASPED
KAYPLQLLMGLLCGKLLKGSQKVVTARTGIDFRQRVVRKKVALRGFSPAHLKTYISLHFK
EQEHRELVSVQLDASPHLWSLCSTPLFCWITFKSFRHLHNVHDSFHLPDTCVTLTGMFLM
LSEVFLSHAASSTPSLLKNNARCTSETFRCGLRTLTAFAKLAIQGVERDGFIFSQEEVSG
CGLTEEELSLGFLRAAGSCDGSPMFEFLHATLQSFLAAFALVLNEEAPPSSILRFFTESR
RRASSCQPFRCCIQDSSKVITKASSSANEHLQFTNLFLCGLLAKANMGLIDLLASPNILK
KKRSVLKSYLSASVRSHLQDVPQYKSSEGSKIHGLSRLLWLLRCIFETGSKEIAQRTARG
IPAGLLKLAYLNMFSSDCTAVSFVLQHQPKLYGLDMDNNNIGDYGVKQLRPMFSKLTILR
LSVNNLYDGSVEVLAEEICKYKIIQTLGLYSNHLTDVGAELVARVIEECPKLQVVKIGKN
NITHVGGRRLAAAIQKSTSIFDVGMWGNCIGDEGAEAFSEALKNHPSLTNLSLSVNGITS
RGGRCLAEALQHNSVLRIFWLVINEFTDEVAPHLAELIRANTGLSHLWLISNRLTVEGIG
QLAEALGHNTTLKEICVKGNQVSGEEEKLFATEKRLFFH
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
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Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0042981 | regulation of apoptosis | biological_proccess | IEA |
GO:0005515 | protein binding | mollecular_function | IEA |
GO:0005622 | intracellular | cell_component | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Ensembl genome browser [?] : ENSTRUG00000014043
- Expression info from Arrayexpress [?] : ENSTRUG00000014043
- Protein expression from Protein Atlas: [?] ENSTRUG00000014043
Click on [?] for more information.