CIITA (Gallus gallus)
Description [+]
- Synonyms: CIITA
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Aves; Gallus gallus
- Short gene description: MHC class II transactivator (CIITA) [Source:UniProtKB/Swiss-Prot;Acc:P33076]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: CIITA-G_gallus
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | NACHT | 41 | 212 |
Protein sequence [+]
CIITA | Gallus gallus | 9031 | length:759
KNSVKSVERDSVTYSQQEKEEAVIERSQIFQMPGGKELETKVIVVLGKAGMGKSVLVQKI
CQDWSNGEFPQFEFVFWFDCKQISLPEKWYSLKDLLLDFFVRPQEGSKEIFEYILQNSTK
VLLVFDGLEGLHGHENSPHCSASQPNKDLCRVKELLSGLIQKKILNGCTLLLTARTKEKV
CQYVSKVDKTIEIVGFSPWQRELYISKYFEGLPSCDNALNLIKEHEYLFSHCYSPVMCRF
VCFLCETILEMGDQGLPSTLTTLFLKFDVTLAQNQENLATLACIAWYLGEKHLSAMKSDL
LPSKEVKEFALKNGFFLPFAFPKHSDTGEEEYGTMFSDFVIQNFLGALHLILTEGIKNKS
LIKYLSFPSKKKKPYNWLHFVPRFLAGLLFLQDDTYFCSLSNKGVKKSTKKQKMLLKYIK
RLQIDNLCPERLLELLHCIYETQNSYLLQHVALRLKPDLSFLGIVLTPPDVHVLSSTLKR
SRKEFSLDLQNSSIDTHGLKDLVGLKNVVSFRASLSDTIRLWKYLEQTKDYELLRVSTEK
FVLDPFKAKTMRDIIDLSDLVEMQEIIINRVQDDSGCSSYQIPAIKNLRKLEFALGPACG
LQGFLKLVEILAAFPSLQHLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQNKITD
VGAEKLATALPSLSSLTTLSLYNNSICDFGAENLAKVLPAMASLRVLDIQYNKITDVGAQ
QLTDSLRKCPHIKNLVMWNPTIPYGVLEHLQQLDSRISV
CQDWSNGEFPQFEFVFWFDCKQISLPEKWYSLKDLLLDFFVRPQEGSKEIFEYILQNSTK
VLLVFDGLEGLHGHENSPHCSASQPNKDLCRVKELLSGLIQKKILNGCTLLLTARTKEKV
CQYVSKVDKTIEIVGFSPWQRELYISKYFEGLPSCDNALNLIKEHEYLFSHCYSPVMCRF
VCFLCETILEMGDQGLPSTLTTLFLKFDVTLAQNQENLATLACIAWYLGEKHLSAMKSDL
LPSKEVKEFALKNGFFLPFAFPKHSDTGEEEYGTMFSDFVIQNFLGALHLILTEGIKNKS
LIKYLSFPSKKKKPYNWLHFVPRFLAGLLFLQDDTYFCSLSNKGVKKSTKKQKMLLKYIK
RLQIDNLCPERLLELLHCIYETQNSYLLQHVALRLKPDLSFLGIVLTPPDVHVLSSTLKR
SRKEFSLDLQNSSIDTHGLKDLVGLKNVVSFRASLSDTIRLWKYLEQTKDYELLRVSTEK
FVLDPFKAKTMRDIIDLSDLVEMQEIIINRVQDDSGCSSYQIPAIKNLRKLEFALGPACG
LQGFLKLVEILAAFPSLQHLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQNKITD
VGAEKLATALPSLSSLTTLSLYNNSICDFGAENLAKVLPAMASLRVLDIQYNKITDVGAQ
QLTDSLRKCPHIKNLVMWNPTIPYGVLEHLQQLDSRISV
Structure links:
Evolution [+]
Explore tree at phylomeDB:   Click here.
DeathBase uses Jalview, an external application that requires Java. Please, check that you have the latest version of Java
installed and that Java is enabled in your browser. When correctly installed your browser should display the following examples properly. You can download the latest version of Java at Java Download Site.
Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0006952 | defense response | biological_proccess | IEA |
GO:0045449 | regulation of transcription | biological_proccess | IEA |
GO:0045944 | positive regulation of transcription from RNA polymerase II promoter | biological_proccess | IEA |
GO:0010553 | negative regulation of specific transcription from RNA polymerase II promoter | biological_proccess | IEA |
GO:0034341 | response to interferon-gamma | biological_proccess | IEA |
GO:0046677 | response to antibiotic | biological_proccess | IEA |
GO:0016481 | negative regulation of transcription | biological_proccess | IEA |
GO:0005515 | protein binding | mollecular_function | IEA |
GO:0000166 | nucleotide binding | mollecular_function | IEA |
GO:0017111 | nucleoside-triphosphatase activity | mollecular_function | IEA |
GO:0005524 | ATP binding | mollecular_function | IEA |
GO:0030528 | transcription regulator activity | mollecular_function | IEA |
GO:0010843 | promoter binding | mollecular_function | IEA |
GO:0008022 | protein C-terminus binding | mollecular_function | IEA |
GO:0016564 | transcription repressor activity | mollecular_function | IEA |
GO:0033613 | transcription activator binding | mollecular_function | IEA |
GO:0043130 | ubiquitin binding | mollecular_function | IEA |
GO:0032403 | protein complex binding | mollecular_function | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Ensembl genome browser [?] : ENSGALG00000007171
- Expression info from Arrayexpress [?] : ENSGALG00000007171
- Protein expression from Protein Atlas: [?] ENSGALG00000007171
Click on [?] for more information.