TRIM39 (Mus musculus)
Description [+]
- Synonyms: TRIM39
- Species: Metazoa;Bilateria;Deuterostoma;Chordata;Vertebrata;Mammalia;Rodentia; Mus musculus
- Short gene description: tripartite motif-containing 39 Gene [Source:MGI Symbol;Acc:MGI:1890659]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: TRIM39-M_musculus
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
Source | Domain Name | Start | End |
---|---|---|---|
PFAM A | zf-C3HC4 | 29 | 69 |
PFAM A | zf-B_box | 102 | 143 |
PFAM A | SPRY | 360 | 485 |
Protein sequence [+]
Trim39 | Mus musculus | 10090 | length:488
MAETSLLEAGTSAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDL
ERDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQTVKRKIRDESLCSQHHEPLSLFCYE
DQEAVCLICAISHTHRPHTVVPMDDATQEYKEKLQKCLEPLEQKLQEITCCKASEEKKPG
ELKRLVESRRQQILKEFEELHRRLDEEQQTLLSRLEEEEQDILQRLRENAAHLGDRRRDL
AHLAAEVEGKCLQSGFEMLKDVKSTLEKCEKVKTMEVTSVSIELEKNFSNFPRQYFALRK
ILKQLIADVTLDPETAHPNLVLSEDRKSVKFVETRLRDLPDTPQRFTFYPCVLATEGFTS
GRHYWEVEVGDKTHWAVGVCRDSVSRKGELTPLPETGYWRVRLWNGDKYAATTTPFTPLH
IKVKPKRVGIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLFYPGIRAGRKNAAPLT
IRPPTDWE
ERDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQTVKRKIRDESLCSQHHEPLSLFCYE
DQEAVCLICAISHTHRPHTVVPMDDATQEYKEKLQKCLEPLEQKLQEITCCKASEEKKPG
ELKRLVESRRQQILKEFEELHRRLDEEQQTLLSRLEEEEQDILQRLRENAAHLGDRRRDL
AHLAAEVEGKCLQSGFEMLKDVKSTLEKCEKVKTMEVTSVSIELEKNFSNFPRQYFALRK
ILKQLIADVTLDPETAHPNLVLSEDRKSVKFVETRLRDLPDTPQRFTFYPCVLATEGFTS
GRHYWEVEVGDKTHWAVGVCRDSVSRKGELTPLPETGYWRVRLWNGDKYAATTTPFTPLH
IKVKPKRVGIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLFYPGIRAGRKNAAPLT
IRPPTDWE
Structure links:
- Smartdomain prediction information: SM00184
- Smartdomain prediction information: SM00336
- Smartdomain prediction information: SM00589
- Smartdomain prediction information: SM00449
- Prosite motif and domain information: PS00518
- Interpro domain information: Q9ESN2
- PFAM domain and domain family information: Q9ESN2
Evolution [+]
Explore tree at phylomeDB:   Click here.
DeathBase uses Jalview, an external application that requires Java. Please, check that you have the latest version of Java
installed and that Java is enabled in your browser. When correctly installed your browser should display the following examples properly. You can download the latest version of Java at Java Download Site.
Gene Ontology [+]
GO id | Name | Ontology type | Evidence |
---|---|---|---|
GO:0000160 | two-component signal transduction system (phosphorelay) | biological_proccess | IEA |
GO:0008270 | zinc ion binding | mollecular_function | IEA |
GO:0005515 | protein binding | mollecular_function | IEA |
GO:0004871 | signal transducer activity | mollecular_function | IEA |
GO:0046872 | metal ion binding | mollecular_function | IEA |
GO:0042802 | identical protein binding | mollecular_function | IEA |
GO:0005622 | intracellular | cell_component | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Gene info from MGI [?] MGI:1890659
- Ensembl genome browser [?] : ENSMUSG00000045409
- Expression info from Arrayexpress [?] : ENSMUSG00000045409
- Protein expression from Protein Atlas: [?] ENSMUSG00000045409
- Community gene edition from Wikigenes: [?] 79263
Click on [?] for more information.