TBL3 (Takifugu rubripes)
Description [+]
- Synonyms: TBL3
- Species: Takifugu rubripes
- Short gene description: WD repeat-containing protein SAZD (Transducin beta-like 3 protein) [Source:UniProtKB/Swiss-Prot;Acc:Q12788]
- Family: Null
- Process:
- Pathways:
- Criteria: homology search
- Curator comment: Null
- WIKI: TBL3-T_rubripes
Structure & Sequence [+]
Pfam domains:
(Pfam is a large collection of protein families.)
| Source | Domain Name | Start | End |
|---|---|---|---|
| PFAM A | WD40 | 95 | 134 |
| PFAM A | WD40 | 182 | 220 |
| PFAM A | WD40 | 381 | 419 |
| PFAM A | WD40 | 425 | 464 |
| PFAM A | WD40 | 479 | 517 |
| PFAM A | WD40 | 524 | 562 |
| PFAM A | WD40 | 566 | 604 |
| PFAM A | WD40 | 608 | 646 |
| PFAM A | Utp13 | 667 | 802 |
Protein sequence [+]
TBL3 | Takifugu rubripes | 31033 | length:855
MANPHLHFKTNYAVSSKIEPFYKGGKVQISKDENYIFCTCGSRINVLEISTGKIVHSVEH
DDQEDITSFALSSDDELLVTASRALLLKQWDWRQAQCTRSWRAIHTAPVASMDFDSTSTL
LATGGCDGTIKIWDVVKQYCTHNLRGSSGVVHLVQFHPDISRLKLFSSSMDCSIWMWDLS
TSLCVCMLQSHYSAVTSLSFSPDGDTMISSGRDKICTVWDLKQQNAKRAIPVYEAVEGVI
FLPENQDFSQIGVKNPKLHFVTAGSKGILRVWDPNTARCVFSQTLGTVSVKKDDEEGEEE
EKKDDNPRSLTHLLLLPASSRLATVTAEHNITLYQLAGLTTLQQFVGYNDEVLDVKFLGK
DDSHIVVATNSCQLKVFELLTNSCQILYGHTDTVLSLDVFRKGSLFASCAKDRSVCVWQM
DSGHVRCVARGTSHTNAVGCISCSRMKASFVASGSLDCTVKVWDLPADLTAAEESIQQLT
LRTTEKAHDKDVNSVAVSPNDKLLASASQDRTAKLWSLAGEGNLGLLGVFRGHRRGVWTV
CFSPVDQVLATSSADGTTKLWSLQDFSCLKTFEGHDASVLKVIFVSRGTQLLTSGSDGLV
KLWTIKTNECVKTLDAHQDKVWGLHGNRRDNRMVTGSADSNITVWEDVTEMEVAEEQAKQ
EEQILKQQELSNLLQEKKYLKALGLAISLDQPHTVLTVIKAIRQTEDSSELLEKTVLKLR
VDQKEALLRYCGVWNTNAKNCQDAQVVLQVLLTHVPPEELLQYQGARTHLEGLVPYTERH
MQRIGRLLQASMFLNYMWQKMRVVGEPSSMDQDEEMDTSPLVQPFFTIDKDSEESSEEED
MDEEEEEAGKAAKRL
DDQEDITSFALSSDDELLVTASRALLLKQWDWRQAQCTRSWRAIHTAPVASMDFDSTSTL
LATGGCDGTIKIWDVVKQYCTHNLRGSSGVVHLVQFHPDISRLKLFSSSMDCSIWMWDLS
TSLCVCMLQSHYSAVTSLSFSPDGDTMISSGRDKICTVWDLKQQNAKRAIPVYEAVEGVI
FLPENQDFSQIGVKNPKLHFVTAGSKGILRVWDPNTARCVFSQTLGTVSVKKDDEEGEEE
EKKDDNPRSLTHLLLLPASSRLATVTAEHNITLYQLAGLTTLQQFVGYNDEVLDVKFLGK
DDSHIVVATNSCQLKVFELLTNSCQILYGHTDTVLSLDVFRKGSLFASCAKDRSVCVWQM
DSGHVRCVARGTSHTNAVGCISCSRMKASFVASGSLDCTVKVWDLPADLTAAEESIQQLT
LRTTEKAHDKDVNSVAVSPNDKLLASASQDRTAKLWSLAGEGNLGLLGVFRGHRRGVWTV
CFSPVDQVLATSSADGTTKLWSLQDFSCLKTFEGHDASVLKVIFVSRGTQLLTSGSDGLV
KLWTIKTNECVKTLDAHQDKVWGLHGNRRDNRMVTGSADSNITVWEDVTEMEVAEEQAKQ
EEQILKQQELSNLLQEKKYLKALGLAISLDQPHTVLTVIKAIRQTEDSSELLEKTVLKLR
VDQKEALLRYCGVWNTNAKNCQDAQVVLQVLLTHVPPEELLQYQGARTHLEGLVPYTERH
MQRIGRLLQASMFLNYMWQKMRVVGEPSSMDQDEEMDTSPLVQPFFTIDKDSEESSEEED
MDEEEEEAGKAAKRL
Structure links:
Evolution [+]
Explore tree at phylomeDB: Click here.
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Gene Ontology [+]
| GO id | Name | Ontology type | Evidence |
|---|---|---|---|
| GO:0006364 | rRNA processing | biological_proccess | IEA |
| GO:0032040 | small-subunit processome | cell_component | IEA |
Check GO Evidence Codes here
Information from other databases [+]
- Ensembl genome browser [?] : ENSTRUG00000007010
- Expression info from Arrayexpress [?] : ENSTRUG00000007010
- Protein expression from Protein Atlas: [?] ENSTRUG00000007010
Click on [?] for more information.
